PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00657.1.g00050.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 208aa    MW: 22004.9 Da    PI: 8.4829
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00657.1.g00050.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.81.6e-191767155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                                  ++++GVr ++ +gr++AeIrdp    k++r++lg+f++ae+Aa+a++aa++ l+g
  Zpz_sc00657.1.g00050.1.sm.mk 17 TRFRGVRKRP-WGRYAAEIRDPA---KKARVWLGTFDSAEDAARAYDAAARMLRG 67
                                  589*******.**********83...36************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.8E-131767IPR001471AP2/ERF domain
CDDcd000183.02E-181775No hitNo description
Gene3DG3DSA:3.30.730.101.6E-311875IPR001471AP2/ERF domain
PROSITE profilePS5103223.4331875IPR001471AP2/ERF domain
SMARTSM003809.0E-371881IPR001471AP2/ERF domain
SuperFamilySSF541713.27E-221876IPR016177DNA-binding domain
PRINTSPR003673.2E-101930IPR001471AP2/ERF domain
PRINTSPR003673.2E-104157IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MRRGGMVAAE PEGDLVTRFR GVRKRPWGRY AAEIRDPAKK ARVWLGTFDS AEDAARAYDA  60
AARMLRGPKA KTNFPLPSAA AAHQHQQRHA AYTPYTAAAA PAAAARPATS SMSSTVESFG  120
GPRPRPVLPS RPPPPPISGG VCRSDCGSSA SVVDDDCVDA AASPSCQLPL PFDLNMPPGG  180
CGFVCYGDEE ELRLTALRLC STDAAMNY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-211976664ATERF1
3gcc_A1e-211976664ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3597093e-76AK359709.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1101F03.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004951621.16e-65PREDICTED: ethylene-responsive transcription factor 3-like
SwissprotO803391e-36ERF82_ARATH; Ethylene-responsive transcription factor 3
TrEMBLB6TFS22e-63B6TFS2_MAIZE; Ethylene-responsive transcription factor 3
STRINGBRADI3G06562.16e-60(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP51232758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-22ethylene responsive element binding factor 3